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yacy_search_server
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some enhancements to caching

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git-svn-id: https://svn.berlios.de/svnroot/repos/yacy/trunk@2236 6c8d7289-2bf4-0310-a012-ef5d649a1542
pull/1/head
orbiter 19 years ago
parent ad03715b64
commit 5b1d77cd4b
7 changed files with 172 additions and 38 deletions
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2
source/de/anomic/kelondro/kelondroBytesIntMap.java
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@ -60,7 +60,7 @@ public class kelondroBytesIntMap extends kelondroRowBufferedSet {
if (System.currentTimeMillis() - this.lastTimeWrote > 10000) this.trim();
return -1;
}
kelondroRow.Entry indexentry = remove(key);
kelondroRow.Entry indexentry = removeMarked(key);
if (indexentry == null) return -1;
return (int) indexentry.getColLongB256(1);
}

2
source/de/anomic/kelondro/kelondroFlexTable.java
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@ -54,7 +54,7 @@ public class kelondroFlexTable extends kelondroFlexWidthArray implements kelondr
if ((i % 10000) == 0) System.out.print('.');
}
this.index.setOrdering(kelondroNaturalOrder.naturalOrder, 0);
index.sort();
index.shape();
System.out.println(index.size() + " index entries initialized and sorted");
}

2
source/de/anomic/kelondro/kelondroIntBytesMap.java
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@ -60,7 +60,7 @@ public class kelondroIntBytesMap extends kelondroRowBufferedSet {
if (System.currentTimeMillis() - this.lastTimeWrote > 10000) this.trim();
return null;
}
kelondroRow.Entry indexentry = super.remove(kelondroNaturalOrder.encodeLong((long) ii, 4));
kelondroRow.Entry indexentry = super.removeMarked(kelondroNaturalOrder.encodeLong((long) ii, 4));
if (indexentry == null) return null;
return indexentry.getColBytes(1);
}

24
source/de/anomic/kelondro/kelondroRecords.java
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@ -81,7 +81,7 @@ public class kelondroRecords {
// constants
private static final int NUL = Integer.MIN_VALUE; // the meta value for the kelondroRecords' NUL abstraction
private static final long memBlock = 500000; // do not fill cache further if the amount of available memory is less that this
private static final long memBlock = 50000000; // do not fill cache further if the amount of available memory is less that this
public final static boolean useWriteBuffer = false;
// memory calculation
@ -427,9 +427,9 @@ public class kelondroRecords {
this.cacheScore = new kelondroMScoreCluster(); // cache control of CP_HIGH caches
}
this.cacheHeaders = new kelondroIntBytesMap[]{
new kelondroIntBytesMap(this.headchunksize, this.cacheSize / 2),
new kelondroIntBytesMap(this.headchunksize, 0),
new kelondroIntBytesMap(this.headchunksize, 0)
new kelondroIntBytesMap(this.headchunksize, 0),
new kelondroIntBytesMap(this.headchunksize, this.cacheSize / 2)
};
this.cacheHeaders[0].setOrdering(kelondroNaturalOrder.naturalOrder, 0);
this.cacheHeaders[1].setOrdering(kelondroNaturalOrder.naturalOrder, 0);
@ -489,6 +489,20 @@ public class kelondroRecords {
};
}
public String cacheNodeStatusString() {
return
"cacheMaxSize=" + cacheSize +
", CP_HIGH=" + cacheHeaders[CP_HIGH].size() +
", CP_MEDIUM=" + cacheHeaders[CP_MEDIUM].size() +
", CP_LOW=" + cacheHeaders[CP_LOW].size() +
", readHit=" + readHit +
", readMiss=" + readMiss +
", writeUnique=" + writeUnique +
", writeDouble=" + writeDouble +
", cacheDelete=" + cacheDelete +
", cacheFlush=" + cacheFlush;
}
private static int[] cacheCombinedStatus(int[] a, int[] b) {
int[] c = new int[a.length];
for (int i = a.length - 1; i >= 0; i--) c[i] = a[i] + b[i];
@ -916,9 +930,9 @@ public class kelondroRecords {
// we simply clear the cache
String error = "cachScore error: " + e.getMessage() + "; cachesize=" + cacheSize + ", cache.size()=[" + cacheHeaders[0].size() + "," + cacheHeaders[1].size() + "," + cacheHeaders[2].size() + "], cacheScore.size()=" + cacheScore.size();
cacheScore = new kelondroMScoreCluster();
cacheHeaders[CP_LOW] = new kelondroIntBytesMap(headchunksize, cacheSize / 2);
cacheHeaders[CP_LOW] = new kelondroIntBytesMap(headchunksize, 0);
cacheHeaders[CP_MEDIUM] = new kelondroIntBytesMap(headchunksize, 0);
cacheHeaders[CP_HIGH] = new kelondroIntBytesMap(headchunksize, 0);
cacheHeaders[CP_HIGH] = new kelondroIntBytesMap(headchunksize, cacheSize / 2);
cacheHeaders[0].setOrdering(kelondroNaturalOrder.naturalOrder, 0);
cacheHeaders[1].setOrdering(kelondroNaturalOrder.naturalOrder, 0);
cacheHeaders[2].setOrdering(kelondroNaturalOrder.naturalOrder, 0);

33
source/de/anomic/kelondro/kelondroRowBufferedSet.java
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@ -164,13 +164,13 @@ public class kelondroRowBufferedSet extends kelondroRowSet {
}
}
public kelondroRow.Entry remove(byte[] a) {
public kelondroRow.Entry removeShift(byte[] a) {
synchronized (buffer) {
if (useRowCollection) {
kelondroRow.Entry oldentry = (kelondroRow.Entry) buffer.remove(a);
if (oldentry == null) {
// try the collection
return super.remove(a);
return super.removeShift(a);
} else {
// the entry was in buffer
return oldentry;
@ -181,11 +181,28 @@ public class kelondroRowBufferedSet extends kelondroRowSet {
}
}
public void removeAll(kelondroRowCollection c) {
public kelondroRow.Entry removeMarked(byte[] a) {
synchronized (buffer) {
if (useRowCollection) {
kelondroRow.Entry oldentry = (kelondroRow.Entry) buffer.remove(a);
if (oldentry == null) {
// try the collection
return super.removeMarked(a);
} else {
// the entry was in buffer
return oldentry;
}
} else {
return (kelondroRow.Entry) buffer.remove(a); // test
}
}
}
public void removeMarkedAll(kelondroRowCollection c) {
// this can be enhanced
synchronized (buffer) {
flush();
super.removeAll(c);
super.removeMarkedAll(c);
}
}
@ -195,8 +212,8 @@ public class kelondroRowBufferedSet extends kelondroRowSet {
c.setOrdering(kelondroNaturalOrder.naturalOrder, 0);
for (int i = 0; i < test.length; i++) c.add(test[i].getBytes());
for (int i = 0; i < test.length; i++) c.add(test[i].getBytes());
c.sort();
c.remove("fuenf".getBytes());
c.removeMarked("fuenf".getBytes());
c.shape();
Iterator i = c.elements();
String s;
System.out.print("INPUT-ITERATOR: ");
@ -207,7 +224,7 @@ public class kelondroRowBufferedSet extends kelondroRowSet {
}
System.out.println("");
System.out.println("INPUT-TOSTRING: " + c.toString());
c.sort();
c.shape();
System.out.println("SORTED : " + c.toString());
c.uniq();
System.out.println("UNIQ : " + c.toString());
@ -232,7 +249,7 @@ public class kelondroRowBufferedSet extends kelondroRowSet {
" entries/second, size = " + c.size());
}
System.out.println("bevore sort: " + ((System.currentTimeMillis() - start) / 1000) + " seconds");
c.sort();
c.shape();
System.out.println("after sort: " + ((System.currentTimeMillis() - start) / 1000) + " seconds");
c.uniq();
System.out.println("after uniq: " + ((System.currentTimeMillis() - start) / 1000) + " seconds");

17
source/de/anomic/kelondro/kelondroRowCollection.java
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@ -145,13 +145,18 @@ public class kelondroRowCollection {
}
}
public final void remove(int p) {
protected final void removeShift(int pos, int dist, int upBound) {
System.arraycopy(chunkcache, (pos + dist) * rowdef.objectsize(),
chunkcache, pos * rowdef.objectsize(),
(upBound - pos - dist) * rowdef.objectsize());
if ((pos < sortBound) && (upBound >= sortBound)) sortBound -= dist;
}
public final void removeShift(int p) {
assert ((p >= 0) && (p < chunkcount) && (chunkcount > 0));
//System.out.println("REMOVE at pos " + p + ", chunkcount=" + chunkcount + ", sortBound=" + sortBound);
synchronized (chunkcache) {
System.arraycopy(chunkcache, (p + 1) * rowdef.objectsize(), chunkcache, p * rowdef.objectsize(), (chunkcount - p - 1) * rowdef.objectsize());
chunkcount--;
if (p < sortBound) sortBound--;
removeShift(p, 1, chunkcount--);
}
this.lastTimeWrote = System.currentTimeMillis();
}
@ -299,7 +304,7 @@ public class kelondroRowCollection {
swap(j, j - 1, 0);
}
private final int swap(int i, int j, int p) {
protected final int swap(int i, int j, int p) {
if (i == j) return p;
if (this.chunkcount * this.rowdef.objectsize() < this.chunkcache.length) {
// there is space in the chunkcache that we can use as buffer
@ -326,7 +331,7 @@ public class kelondroRowCollection {
while (i < chunkcount - 1) {
if (compare(i, i + 1) == 0) {
//System.out.println("DOUBLE: " + new String(this.chunkcache, this.chunksize * i, this.chunksize));
remove(i);
removeShift(i);
} else {
i++;
}

128
source/de/anomic/kelondro/kelondroRowSet.java
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@ -24,19 +24,25 @@
package de.anomic.kelondro;
import java.util.TreeSet;
import java.util.Iterator;
import java.util.Random;
public class kelondroRowSet extends kelondroRowCollection {
private static final int collectionReSortLimit = 90;
private static final int removeMaxSize = 100;
private TreeSet removeMarker;
public kelondroRowSet(kelondroRow rowdef) {
super(rowdef);
this.removeMarker = new TreeSet();
}
public kelondroRowSet(kelondroRow rowdef, int objectCount) {
super(rowdef, objectCount);
this.removeMarker = new TreeSet();
}
public kelondroRow.Entry get(byte[] key) {
@ -45,17 +51,24 @@ public class kelondroRowSet extends kelondroRowCollection {
private kelondroRow.Entry get(byte[] key, int astart, int alength) {
synchronized (chunkcache) {
int i = find(key, astart, alength);
if (i >= 0) return get(i);
}
int index = find(key, astart, alength);
if ((index < 0) || (isMarkedRemoved(index))){
return null;
} else {
return get(index);
}
}
}
public kelondroRow.Entry put(kelondroRow.Entry entry) {
int index = -1;
synchronized (chunkcache) {
index = find(entry.bytes(), super.rowdef.colstart[super.sortColumn], super.rowdef.width(super.sortColumn));
if (index < 0) {
if (isMarkedRemoved(index)) {
set(index, entry);
removeMarker.remove(new Integer(index));
return null;
} else if (index < 0) {
add(entry);
return null;
} else {
@ -66,11 +79,15 @@ public class kelondroRowSet extends kelondroRowCollection {
}
}
public kelondroRow.Entry remove(byte[] a) {
return remove(a, 0, a.length);
public int size() {
return super.size() - removeMarker.size();
}
public kelondroRow.Entry removeMarked(byte[] a) {
return removeMarked(a, 0, a.length);
}
private kelondroRow.Entry remove(byte[] a, int astart, int alength) {
private kelondroRow.Entry removeMarked(byte[] a, int astart, int alength) {
// the byte[] a may be shorter than the chunksize
if (chunkcount == 0) return null;
kelondroRow.Entry b = null;
@ -78,17 +95,98 @@ public class kelondroRowSet extends kelondroRowCollection {
int p = find(a, astart, alength);
if (p < 0) return null;
b = get(p);
remove(p);
if (p < sortBound) {
removeMarker.add(new Integer(p));
} else {
super.swap(p, --chunkcount, 0);
}
}
if (removeMarker.size() == chunkcount) {
chunkcount = 0;
sortBound = 0;
removeMarker.clear();
}
if (removeMarker.size() >= removeMaxSize) resolveMarkedRemoved();
return b;
}
private boolean isMarkedRemoved(int index) {
return removeMarker.contains(new Integer(index));
}
public void shape() {
//System.out.println("SHAPE");
synchronized (chunkcache) {
resolveMarkedRemoved();
super.sort();
}
}
/*
private void resolveMarkedRemoved1() {
//long start = System.currentTimeMillis();
//int c = removeMarker.size();
Integer idx = new Integer(sortBound);
while (removeMarker.size() > 0) {
idx = (Integer) removeMarker.last();
removeMarker.remove(idx);
chunkcount--;
if (idx.intValue() < chunkcount) {
super.swap(idx.intValue(), chunkcount, 0);
}
}
if (idx.intValue() < sortBound) sortBound = idx.intValue();
removeMarker.clear();
//System.out.println("RESOLVED " + c + " entries in " + (System.currentTimeMillis() - start) + " milliseconds");
}
*/
private void resolveMarkedRemoved() {
if (removeMarker.size() == 0) return;
Integer nxt = (Integer) removeMarker.first();
removeMarker.remove(nxt);
int idx = nxt.intValue();
int d = 1;
while (removeMarker.size() > 0) {
nxt = (Integer) removeMarker.first();
removeMarker.remove(nxt);
super.removeShift(idx, d, nxt.intValue());
idx = nxt.intValue() - d;
d++;
}
super.removeShift(idx, d, chunkcount);
chunkcount -= d;
removeMarker.clear();
}
protected kelondroRow.Entry removeShift(byte[] a) {
return removeShift(a, 0, a.length);
}
private kelondroRow.Entry removeShift(byte[] a, int astart, int alength) {
// the byte[] a may be shorter than the chunksize
if (chunkcount == 0) return null;
kelondroRow.Entry b = null;
synchronized(chunkcache) {
int p = find(a, astart, alength);
if (p < 0) return null;
b = get(p);
if (p < sortBound) {
removeShift(p);
} else {
super.swap(p, --chunkcount, 0);
}
}
return b;
}
public void removeAll(kelondroRowCollection c) {
public void removeMarkedAll(kelondroRowCollection c) {
Iterator i = c.elements();
byte[] b;
while (i.hasNext()) {
b = (byte[]) i.next();
remove(b, 0, b.length);
removeMarked(b, 0, b.length);
}
}
@ -113,7 +211,7 @@ public class kelondroRowSet extends kelondroRowCollection {
if (this.sortOrder == null) return iterativeSearch(a, astart, alength);
// check if a re-sorting make sense
if ((this.chunkcount - this.sortBound) > collectionReSortLimit) sort();
if ((this.chunkcount - this.sortBound) > collectionReSortLimit) shape();
// first try to find in sorted area
int p = binarySearch(a, astart, alength);
@ -177,8 +275,8 @@ public class kelondroRowSet extends kelondroRowCollection {
c.setOrdering(kelondroNaturalOrder.naturalOrder, 0);
for (int i = 0; i < test.length; i++) c.add(test[i].getBytes());
for (int i = 0; i < test.length; i++) c.add(test[i].getBytes());
c.sort();
c.remove("fuenf".getBytes(), 0, 5);
c.shape();
c.removeMarked("fuenf".getBytes(), 0, 5);
Iterator i = c.elements();
String s;
System.out.print("INPUT-ITERATOR: ");
@ -189,7 +287,7 @@ public class kelondroRowSet extends kelondroRowCollection {
}
System.out.println("");
System.out.println("INPUT-TOSTRING: " + c.toString());
c.sort();
c.shape();
System.out.println("SORTED : " + c.toString());
c.uniq();
System.out.println("UNIQ : " + c.toString());
@ -214,7 +312,7 @@ public class kelondroRowSet extends kelondroRowCollection {
" entries/second, size = " + c.size());
}
System.out.println("bevore sort: " + ((System.currentTimeMillis() - start) / 1000) + " seconds");
c.sort();
c.shape();
System.out.println("after sort: " + ((System.currentTimeMillis() - start) / 1000) + " seconds");
c.uniq();
System.out.println("after uniq: " + ((System.currentTimeMillis() - start) / 1000) + " seconds");

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