// ReferenceContainerArray.java // (C) 2009 by Michael Peter Christen; mc@yacy.net, Frankfurt a. M., Germany // first published 04.01.2009 on http://yacy.net // // $LastChangedDate$ // $LastChangedRevision$ // $LastChangedBy$ // // LICENSE // // This program is free software; you can redistribute it and/or modify // it under the terms of the GNU General Public License as published by // the Free Software Foundation; either version 2 of the License, or // (at your option) any later version. // // This program is distributed in the hope that it will be useful, // but WITHOUT ANY WARRANTY; without even the implied warranty of // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the // GNU General Public License for more details. // // You should have received a copy of the GNU General Public License // along with this program; if not, write to the Free Software // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA package net.yacy.kelondro.rwi; import java.io.File; import java.io.IOException; import java.util.Date; import java.util.Iterator; import net.yacy.cora.ranking.Rating; import net.yacy.kelondro.blob.ArrayStack; import net.yacy.kelondro.blob.BLOB; import net.yacy.kelondro.index.HandleMap; import net.yacy.kelondro.index.Row; import net.yacy.kelondro.index.RowSet; import net.yacy.kelondro.index.RowSpaceExceededException; import net.yacy.kelondro.logging.Log; import net.yacy.kelondro.order.ByteOrder; import net.yacy.kelondro.order.CloneableIterator; public final class ReferenceContainerArray { protected final ReferenceFactory factory; protected final ArrayStack array; private final IODispatcher merger; /** * open a index container array based on BLOB dumps. The content of the BLOBs will not be read * unless a .idx file exists. Only the .idx file is opened to get a fast read access to * the BLOB. This class provides no write methods, because BLOB files should not be * written in random access. To support deletion, a write access to the BLOB for deletion * is still possible * @param payloadrow the row definition for the BLOB data structure * @param log * @throws IOException */ public ReferenceContainerArray( final File heapLocation, final String prefix, final ReferenceFactory factory, final ByteOrder termOrder, final int termSize, final IODispatcher merger) throws IOException { this.factory = factory; this.array = new ArrayStack( heapLocation, prefix, termOrder, termSize, 0, true); assert merger != null; this.merger = merger; } public void close() { this.array.close(true); } public void clear() throws IOException { this.array.clear(); } public long mem() { return this.array.mem(); } public int[] sizes() { return (this.array == null) ? new int[0] : this.array.sizes(); } public ByteOrder ordering() { return this.array.ordering(); } public File newContainerBLOBFile() { return this.array.newBLOB(new Date()); } public void mountBLOBFile(final File location) throws IOException { this.array.mountBLOB(location, false); } public Row rowdef() { return this.factory.getRow(); } /** * return an iterator object that creates top-level-clones of the indexContainers * in the cache, so that manipulations of the iterated objects do not change * objects in the cache. * @throws IOException */ public CloneableIterator> referenceContainerIterator(final byte[] startWordHash, final boolean rot) { try { return new ReferenceContainerIterator(startWordHash, rot); } catch (final IOException e) { Log.logException(e); return null; } } public class ReferenceContainerIterator implements CloneableIterator>, Iterable> { // this class exists, because the wCache cannot be iterated with rotation // and because every indexContainer Object that is iterated must be returned as top-level-clone // so this class simulates wCache.tailMap(startWordHash).values().iterator() // plus the mentioned features private final boolean rot; protected CloneableIterator iterator; public ReferenceContainerIterator(final byte[] startWordHash, final boolean rot) throws IOException { this.rot = rot; this.iterator = ReferenceContainerArray.this.array.keys(true, startWordHash); // The collection's iterator will return the values in the order that their corresponding keys appear in the tree. } public ReferenceContainerIterator clone(final Object secondWordHash) { try { return new ReferenceContainerIterator((byte[]) secondWordHash, this.rot); } catch (final IOException e) { Log.logException(e); return null; } } public boolean hasNext() { if (this.iterator == null) return false; if (this.rot) return true; return this.iterator.hasNext(); } public ReferenceContainer next() { if (this.iterator.hasNext()) try { return get(this.iterator.next()); } catch (final Exception e) { Log.logException(e); return null; } // rotation iteration if (!this.rot) { return null; } try { this.iterator = ReferenceContainerArray.this.array.keys(true, null); return get(this.iterator.next()); } catch (final Exception e) { Log.logException(e); return null; } } public void remove() { this.iterator.remove(); } public Iterator> iterator() { return this; } } /** * return an iterator object that counts the number of references in indexContainers * the startWordHash may be null to iterate all from the beginning * @throws IOException */ public CloneableIterator> referenceCountIterator(final byte[] startWordHash, final boolean rot) { try { return new ReferenceCountIterator(startWordHash, rot); } catch (final IOException e) { Log.logException(e); return null; } } public class ReferenceCountIterator implements CloneableIterator>, Iterable> { private final boolean rot; protected CloneableIterator iterator; public ReferenceCountIterator(final byte[] startWordHash, final boolean rot) throws IOException { this.rot = rot; this.iterator = ReferenceContainerArray.this.array.keys(true, startWordHash); // The collection's iterator will return the values in the order that their corresponding keys appear in the tree. } public ReferenceCountIterator clone(final Object secondWordHash) { try { return new ReferenceCountIterator((byte[]) secondWordHash, this.rot); } catch (final IOException e) { Log.logException(e); return null; } } public boolean hasNext() { if (this.iterator == null) return false; if (this.rot) return true; return this.iterator.hasNext(); } public Rating next() { byte[] reference; if (this.iterator.hasNext()) try { reference = this.iterator.next(); return new Rating(reference, count(reference)); } catch (final Exception e) { Log.logException(e); return null; } // rotation iteration if (!this.rot) { return null; } try { this.iterator = ReferenceContainerArray.this.array.keys(true, null); reference = this.iterator.next(); return new Rating(reference, count(reference)); } catch (final Exception e) { Log.logException(e); return null; } } public void remove() { this.iterator.remove(); } public Iterator> iterator() { return this; } } /** * test if a given key is in the heap * this works with heaps in write- and read-mode * @param key * @return true, if the key is used in the heap; false otherwise * @throws IOException */ public boolean has(final byte[] termHash) { return this.array.containsKey(termHash); } /** * get a indexContainer from a heap * @param key * @return the indexContainer if one exist, null otherwise * @throws IOException * @throws RowSpaceExceededException */ public ReferenceContainer get(final byte[] termHash) throws IOException, RowSpaceExceededException { final long timeout = System.currentTimeMillis() + 3000; final Iterator entries = this.array.getAll(termHash).iterator(); if (entries == null || !entries.hasNext()) return null; final byte[] a = entries.next(); int k = 1; ReferenceContainer c = new ReferenceContainer(this.factory, termHash, RowSet.importRowSet(a, this.factory.getRow())); if (System.currentTimeMillis() > timeout) { Log.logWarning("ReferenceContainerArray", "timout in index retrieval (1): " + k + " tables searched. timeout = 3000"); return c; } while (entries.hasNext()) { c = c.merge(new ReferenceContainer(this.factory, termHash, RowSet.importRowSet(entries.next(), this.factory.getRow()))); k++; if (System.currentTimeMillis() > timeout) { Log.logWarning("ReferenceContainerArray", "timout in index retrieval (2): " + k + " tables searched. timeout = 3000"); return c; } } return c; } public int count(final byte[] termHash) throws IOException { final long timeout = System.currentTimeMillis() + 3000; final Iterator entries = this.array.lengthAll(termHash).iterator(); if (entries == null || !entries.hasNext()) return 0; final Long a = entries.next(); int k = 1; int c = RowSet.importRowCount(a, this.factory.getRow()); assert c >= 0; if (System.currentTimeMillis() > timeout) { Log.logWarning("ReferenceContainerArray", "timout in index retrieval (1): " + k + " tables searched. timeout = 3000"); return c; } while (entries.hasNext()) { c += RowSet.importRowCount(entries.next(), this.factory.getRow()); assert c >= 0; k++; if (System.currentTimeMillis() > timeout) { Log.logWarning("ReferenceContainerArray", "timout in index retrieval (2): " + k + " tables searched. timeout = 3000"); return c; } } assert c >= 0; return c; } /** * calculate an upper limit for a ranking number of the container size * the returned number is not a counter. It can only be used to compare the * ReferenceContainer, that may be produced as a result of get() * @param termHash * @return a ranking number * @throws IOException */ public long lenghtRankingUpperLimit(final byte[] termHash) throws IOException { return this.array.lengthAdd(termHash); } /** * delete a indexContainer from the heap cache. This can only be used for write-enabled heaps * @param wordHash * @return the indexContainer if the cache contained the container, null otherwise * @throws IOException */ public void delete(final byte[] termHash) throws IOException { // returns the index that had been deleted this.array.delete(termHash); } public int reduce(final byte[] termHash, final ContainerReducer reducer) throws IOException, RowSpaceExceededException { return this.array.reduce(termHash, new BLOBReducer(termHash, reducer)); } public class BLOBReducer implements BLOB.Reducer { ContainerReducer rewriter; byte[] wordHash; public BLOBReducer(final byte[] wordHash, final ContainerReducer rewriter) { this.rewriter = rewriter; this.wordHash = wordHash; } public byte[] rewrite(final byte[] b) throws RowSpaceExceededException { if (b == null) return null; final ReferenceContainer c = this.rewriter.reduce(new ReferenceContainer(ReferenceContainerArray.this.factory, this.wordHash, RowSet.importRowSet(b, ReferenceContainerArray.this.factory.getRow()))); if (c == null) return null; final byte bb[] = c.exportCollection(); assert bb.length <= b.length; return bb; } } public interface ContainerReducer { public ReferenceContainer reduce(ReferenceContainer container); } public int entries() { return this.array.entries(); } public boolean shrink(final long targetFileSize, final long maxFileSize) { if (this.array.entries() < 2) return false; boolean donesomething = false; // first try to merge small files that match while (this.merger.queueLength() < 3 || this.array.entries() >= 50) { final File[] ff = this.array.unmountBestMatch(2.0f, targetFileSize); if (ff == null) break; Log.logInfo("RICELL-shrink1", "unmountBestMatch(2.0, " + targetFileSize + ")"); this.merger.merge(ff[0], ff[1], this.factory, this.array, newContainerBLOBFile()); donesomething = true; } // then try to merge simply any small file while (this.merger.queueLength() < 2) { final File[] ff = this.array.unmountSmallest(targetFileSize); if (ff == null) break; Log.logInfo("RICELL-shrink2", "unmountSmallest(" + targetFileSize + ")"); this.merger.merge(ff[0], ff[1], this.factory, this.array, newContainerBLOBFile()); donesomething = true; } // if there is no small file, then merge matching files up to limit while (this.merger.queueLength() < 1) { final File[] ff = this.array.unmountBestMatch(2.0f, maxFileSize); if (ff == null) break; Log.logInfo("RICELL-shrink3", "unmountBestMatch(2.0, " + maxFileSize + ")"); this.merger.merge(ff[0], ff[1], this.factory, this.array, newContainerBLOBFile()); donesomething = true; } // rewrite old files (hack from sixcooler, see http://forum.yacy-websuche.de/viewtopic.php?p=15004#p15004) while (this.merger.queueLength() < 1) { final File ff = this.array.unmountOldest(); if (ff == null) break; Log.logInfo("RICELL-shrink4/rewrite", "unmountOldest()"); this.merger.merge(ff, null, this.factory, this.array, newContainerBLOBFile()); donesomething = true; } return donesomething; } public static HandleMap referenceHashes( final File heapLocation, final ReferenceFactory factory, final ByteOrder termOrder, final Row payloadrow) throws IOException, RowSpaceExceededException { System.out.println("CELL REFERENCE COLLECTION startup"); final HandleMap references = new HandleMap(payloadrow.primaryKeyLength, termOrder, 4, 1000000, heapLocation.getAbsolutePath()); final String[] files = heapLocation.list(); for (final String f: files) { if (f.length() < 22 || !f.startsWith("text.index") || !f.endsWith(".blob")) continue; final File fl = new File(heapLocation, f); System.out.println("CELL REFERENCE COLLECTION opening blob " + fl); final CloneableIterator> ei = new ReferenceIterator(fl, factory); ReferenceContainer container; final long start = System.currentTimeMillis(); long lastlog = start - 27000; int count = 0; ReferenceType reference; byte[] mh; while (ei.hasNext()) { container = ei.next(); if (container == null) continue; final Iterator refi = container.entries(); while (refi.hasNext()) { reference = refi.next(); if (reference == null) continue; mh = reference.urlhash(); if (mh == null) continue; references.inc(mh); } count++; // write a log if (System.currentTimeMillis() - lastlog > 30000) { System.out.println("CELL REFERENCE COLLECTION scanned " + count + " RWI index entries. "); lastlog = System.currentTimeMillis(); } } } System.out.println("CELL REFERENCE COLLECTION finished"); return references; } }